Creating a 3D scatter plot in R so you can see the third dimension (CC083)
The original video is available on https://www.youtube.com/watch?v=6dyjG8p8U0Q In this episode of Code Club, Pat will show you how to create a 3D scatter plot in R without settling for projecting it into only 2D. Pat will demonstrate how to use the RGL package from R to create a static 2D version of the scatter plot, an animated GIF of a rotating scatter plot, and in an interactive version of the plot that you can embed in a web page or html-based slide deck. Be sure to check out the accompanying blog post to play with the interactive 3D ordination yourself! You can find it at https://www.riffomonas.org/code_club/.... Pat uses RStudio and functions from the ggplot2 package and other packages from the tidyverse. Do you have a figure that you would like to receive a critique or help improving? Let me know and I'd be happy to arrange a guest appearance! If you're interested in taking an upcoming 3 day R workshop, email me at [email protected]! R: https://r-project.org RStudio: https://rstudio.com Raw data: https://github.com/riffomonas/raw_dat... Workshops: https://www.mothur.org/wiki/workshops You can also find complete tutorials for learning R with the tidyverse using... Microbial ecology data: https://www.riffomonas.org/minimalR/ General data: https://www.riffomonas.org/generalR/ 0:00 2D is a constraint 2:09 3D scatter plot in RGL 10:00 Rendering a 3D figure in 2D (why!?!?) 11:30 Creating a GIF of rotating ordination 15:24 Embedding interactive in web site 17:37 Embedding interactive in HTML-based slide deck 19:33 Conclusion
The original video is available on https://www.youtube.com/watch?v=6dyjG8p8U0Q In this episode of Code Club, Pat will show you how to create a 3D scatter plot in R without settling for projecting it into only 2D. Pat will demonstrate how to use the RGL package from R to create a static 2D version of the scatter plot, an animated GIF of a rotating scatter plot, and in an interactive version of the plot that you can embed in a web page or html-based slide deck. Be sure to check out the accompanying blog post to play with the interactive 3D ordination yourself! You can find it at https://www.riffomonas.org/code_club/.... Pat uses RStudio and functions from the ggplot2 package and other packages from the tidyverse. Do you have a figure that you would like to receive a critique or help improving? Let me know and I'd be happy to arrange a guest appearance! If you're interested in taking an upcoming 3 day R workshop, email me at [email protected]! R: https://r-project.org RStudio: https://rstudio.com Raw data: https://github.com/riffomonas/raw_dat... Workshops: https://www.mothur.org/wiki/workshops You can also find complete tutorials for learning R with the tidyverse using... Microbial ecology data: https://www.riffomonas.org/minimalR/ General data: https://www.riffomonas.org/generalR/ 0:00 2D is a constraint 2:09 3D scatter plot in RGL 10:00 Rendering a 3D figure in 2D (why!?!?) 11:30 Creating a GIF of rotating ordination 15:24 Embedding interactive in web site 17:37 Embedding interactive in HTML-based slide deck 19:33 Conclusion